One of the sport's most respected thinkers, Ikin will remain in charge of the QRL for the upcoming Origin series and leave his post at the end of July to pivot into a non-football role.
"I have thoroughly enjoyed my time working at the QRL," Ikin said in a press statement on Thursday.
"I've met so many great people and created some incredible memories, I leave feeling very grateful."
Ikin's departure from the QRL comes with Maroons coach Billy Slater approaching the end of his contract, having signed a three-year deal in 2023.
The 49-year-old will remain involved with the Maroons Foundation, the QRL's non-profit arm that works in the community.
"Ben's leadership has placed the QRL in a very strong position in the sporting landscape and our ongoing strategies and programs are well advanced," said QRL chairman Brian Canavan.
Ikin joined the QRL in 2023 after helping oversee Brisbane's rebuild as football boss under then-coach Kevin Walters.
He has previously served in management roles at NRL sides Gold Coast and North Queensland, and was a long-time analyst for Fox Sports' rugby league coverage.
Ikin won the 2000 premiership with Brisbane and played 17 State of Origin matches for Queensland during his professional playing career.
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